Abstract
During the analysis of a collection of Pseudomonas strains linked to an outbreak in an intensive care unit at King Faisal Specialist Hospital and Research Center in 2019, one isolate (CFS3442<jats:sup/>T) was identified phenotypically as Pseudomonas aeruginosa. However, whole-genome sequencing revealed its true identity as a member of the genus Stenotrophomonas, distinct from both P. aeruginosa and Stenotrophomonas maltophilia. The isolate demonstrated: (i) a significant phylogenetic distance from P. aeruginosa; (ii) considerable genomic differences from several S. maltophilia reference strains and other Stenotrophomonas species; and (iii) unique phenotypic characteristics. Based on the combined geno- and phenotypic data, we propose that this isolate represents a novel species within the genus Stenotrophomonas, for which the name Stenotrophomonas riyadhensis sp. nov. is proposed. The type strain is CFS3442<jats:sup/>T (=NCTC 14921<jats:sup/>T=LMG 33162<jats:sup/>T).
| Original language | English |
|---|---|
| Article number | 006250 |
| Journal | International Journal of Systematic and Evolutionary Microbiology |
| Volume | 74 |
| Issue number | 2 |
| DOIs | |
| Publication status | Published - 23 Feb 2024 |
| Externally published | Yes |
Keywords
- Stenotrophomonas maltophilia
- Stenotrophomonas riyadhensis
- average nucleotide identity (ANI)
- digital DNA–DNA hybridization (dDDH)
- genomic taxonomy
- hospital outbreak
- tetra nucleotide z-scores
- whole-genome sequencing