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Microbial Solutions in Agriculture: Enhancing Soil Health and Resilience Through Bio-Inoculants and Bioremediation

  • Rahul Kumar
  • , Beatrice Farda
  • , Amedeo Mignini
  • , Rihab Djebaili
  • , Leonard Koolman
  • , Alivia Paul
  • , Subhankar Mondal
  • , Joy M. Joel
  • , Aditi Pandit
  • , Periyasamy Panneerselvam
  • , Marika Pellegrini
  • , Debasis Mitra

Research output: Contribution to journalReview articlepeer-review

Abstract

Soil microbes are important for maintaining agricultural ecosystems by promoting nutrient cycling, plant growth, and soil resilience. Microbial-based inoculants, such as bio-inoculants and bioremediation agents, have been identified as suitable means to promote soil health, reduce environmental deterioration, and achieve sustainable agriculture. Bio-inoculants, such as biofertilizers and biopesticides, promote nutrient availability, plant growth, and chemical input dependency reduction. Diverse microbial populations, especially plant growth-promoting bacteria (PGPB), enhance resistance by promoting a symbiotic association with plants and inducing natural resistance against insects. Bioremediation, the second significant microbial intervention, is the use of microorganisms for detoxifying and rehabilitating polluted soils. Methods effectively degrade organic pollutants, immobilize heavy metals, and mitigate the toxic effects of industrial and agricultural pollutants. Recent advances in microbial ecology and biotechnology, such as metagenomics, have transformed the knowledge of microbial soil communities, and tailor-made microbial formulations and monitoring equipment may be developed to maximize their activity. Though promising, environmental heterogeneity, scalability, and lack of field-based evidence constrain their widespread application. Multidimensional applications of microbial solutions in agroecology are explored in this review, with a focus on their potential in maintaining soil health, crop production, and environmental sustainability. It also addresses the application of bioremediation and microbial inoculants in agroecosystems and technological innovations with future research objectives. Microbial innovation to shape the soil microbiome offers a valid tool for addressing global challenges in agriculture, food security, and ecological resilience in the context of climate change.

Original languageEnglish
Article number28
JournalBacteria
Volume4
Issue number3
DOIs
Publication statusPublished - Sep 2025

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 2 - Zero Hunger
    SDG 2 Zero Hunger
  2. SDG 9 - Industry, Innovation, and Infrastructure
    SDG 9 Industry, Innovation, and Infrastructure
  3. SDG 13 - Climate Action
    SDG 13 Climate Action

Keywords

  • bio-inoculants
  • biofertilizers
  • biopesticides
  • climate-smart agriculture
  • environmental sustainability
  • microbial solutions
  • soil microbiome

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