Hybrid modelling for stroke care: Review and suggestions of new approaches for risk assessment and simulation of scenarios

Tilda Herrgårdh, Vince I. Madai, John D. Kelleher, Rasmus Magnusson, Mika Gustafsson, Lili Milani, Peter Gennemark, Gunnar Cedersund

Research output: Contribution to journalReview articlepeer-review

Abstract

Stroke is an example of a complex and multi-factorial disease involving multiple organs, timescales, and disease mechanisms. To deal with this complexity, and to realize Precision Medicine of stroke, mathematical models are needed. Such approaches include: 1) machine learning, 2) bioinformatic network models, and 3) mechanistic models. Since these three approaches have complementary strengths and weaknesses, a hybrid modelling approach combining them would be the most beneficial. However, no concrete approach ready to be implemented for a specific disease has been presented to date. In this paper, we both review the strengths and weaknesses of the three approaches, and propose a roadmap for hybrid modelling in the case of stroke care. We focus on two main tasks needed for the clinical setting: a) For stroke risk calculation, we propose a new two-step approach, where non-linear mixed effects models and bioinformatic network models yield biomarkers which are used as input to a machine learning model and b) For simulation of care scenarios, we propose a new four-step approach, which revolves around iterations between simulations of the mechanistic models and imputations of non-modelled or non-measured variables. We illustrate and discuss the different approaches in the context of Precision Medicine for stroke.

Original languageEnglish
Article number102694
Number of pages14
JournalNeuroImage: Clinical
Volume31
DOIs
Publication statusPublished - Jan 2021

Keywords

  • Bioinformatics
  • Machine learning
  • Mechanistic modelling
  • Precision medicine
  • Stroke

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